Répertoire du corps professoral

Publications des 5 dernières années

Soibean Molecular Biology and Evolution, 2024. Nicola Alexandra Vogel, Joshua Daniel Rubin, Anders Gorm Pedersen, Peter Wad Sackett, Mikkel Winther Pedersen, Gabriel Renaud. DOI 10.1093/molbev/msae203

Population genomics of post-glacial western Eurasia Nature, 2024. Morten E. Allentoft, Martin Sikora, Alba Refoyo-Martínez, Evan K. Irving-Pease, Anders Fischer, William Barrie, Andrés Ingason, Jesper Stenderup, Karl Göran Sjögren, Alice Pearson, Bárbara Sousa da Mota, Bettina Schulz Paulsson, Alma Halgren, Ruairidh Macleod, Marie Louise Schjellerup Jørkov, Fabrice Demeter, Lasse Sørensen, Poul Otto Nielsen, Rasmus A. Henriksen, Tharsika Vimala, Hugh McColl, Ashot Margaryan, Melissa Ilardo, Andrew Vaughn, Morten Fischer Mortensen, Anne Birgitte Nielsen, Mikkel Ulfeldt Hede, Niels Nørkjær Johannsen, Peter Rasmussen, Lasse Vinner, Gabriel Renaud, Aaron Stern, Theis Zetner Trolle Jensen, Gabriele Scorrano, Hannes Schroeder, Per Lysdahl, Abigail Daisy Ramsøe, Andrei Skorobogatov, Andrew Joseph Schork, Anders Rosengren, Anthony Ruter, Alan Outram, Aleksey A. Timoshenko, Alexandra Buzhilova, Alfredo Coppa, Alisa Zubova, Ana Maria Silva, Anders J. Hansen, Andrey Gromov, Andrey Logvin, Anne Birgitte Gotfredsen, Bjarne Henning Nielsen, Borja González-Rabanal, Carles Lalueza-Fox, Catriona J. McKenzie, Charleen Gaunitz, Concepción Blasco, Corina Liesau, Cristina Martinez-Labarga, Dmitri V. Pozdnyakov, David Cuenca-Solana, David O. Lordkipanidze, Dmitri En’shin, Domingo C. Salazar-García, T. Douglas Price, Dušan Borić, Elena Kostyleva, Elizaveta V. Veselovskaya, Emma R. Usmanova, Enrico Cappellini, Erik Brinch Petersen, Esben Kannegaard, Francesca Radina, Fulya Eylem Yediay, Henri Duday, Igor Gutiérrez-Zugasti, Ilya Merts, Inna Potekhina, Irina Shevnina, Isin Altinkaya, Jean Guilaine, Jesper Hansen, Joan Emili Aura Tortosa, João Zilhão, Jorge Vega, Kristoffer Buck Pedersen, Krzysztof Tunia, Lei Zhao, Liudmila N. Mylnikova, Lars Larsson, Laure Metz, Levon Yepiskoposyan, Lisbeth Pedersen, Lucia Sarti, Ludovic Orlando, Ludovic Slimak, Lutz Klassen, Malou Blank, Manuel González-Morales, Mara Silvestrini, Maria Vretemark, Marina S. Nesterova, Marina Rykun, Mario Federico Rolfo, Marzena Szmyt, Marcin Przybyła, Mauro Calattini, Mikhail Sablin, Miluše Dobisíková, Morten Meldgaard, Morten Johansen, Natalia Berezina, Nick Card, Nikolai A. Saveliev, Olga Poshekhonova, Olga Rickards, Olga V. Lozovskaya, Olivér Gábor, Otto Christian Uldum, Paola Aurino, Pavel Kosintsev, Patrice Courtaud, Patricia Ríos, Peder Mortensen, Per Lotz, Per Persson, Pernille Bangsgaard, Peter de Barros Damgaard, Peter Vang Petersen, Pilar Prieto Martinez, Piotr Włodarczak, Roman V. Smolyaninov, Rikke Maring, Roberto Menduiña, Ruben Badalyan, Rune Iversen, Ruslan Turin, Sergey Vasilyev, Sidsel Wåhlin, Svetlana Borutskaya, Svetlana Skochina, Søren Anker Sørensen, Søren H. Andersen, Thomas Jørgensen, Yuri B. Serikov, Vyacheslav I. Molodin, Vaclav Smrcka, Victor Merts, Vivek Appadurai, Vyacheslav Moiseyev, Yvonne Magnusson, Kurt H. Kjær, Niels Lynnerup, Daniel J. Lawson, Peter H. Sudmant, Simon Rasmussen, Thorfinn Sand Korneliussen, Richard Durbin, Rasmus Nielsen, Olivier Delaneau, Thomas Werge, Fernando Racimo, Kristian Kristiansen, Eske Willerslev. DOI 10.1038/s41586-023-06865-0

100 ancient genomes show repeated population turnovers in Neolithic Denmark Nature, 2024. Morten E. Allentoft, Martin Sikora, Anders Fischer, Karl Göran Sjögren, Andrés Ingason, Ruairidh Macleod, Anders Rosengren, Bettina Schulz Paulsson, Marie Louise Schjellerup Jørkov, Maria Novosolov, Jesper Stenderup, T. Douglas Price, Morten Fischer Mortensen, Anne Birgitte Nielsen, Mikkel Ulfeldt Hede, Lasse Sørensen, Poul Otto Nielsen, Peter Rasmussen, Theis Zetner Trolle Jensen, Alba Refoyo-Martínez, Evan K. Irving-Pease, William Barrie, Alice Pearson, Bárbara Sousa da Mota, Fabrice Demeter, Rasmus A. Henriksen, Tharsika Vimala, Hugh McColl, Andrew Vaughn, Lasse Vinner, Gabriel Renaud, Aaron Stern, Niels Nørkjær Johannsen, Abigail Daisy Ramsøe, Andrew Joseph Schork, Anthony Ruter, Anne Birgitte Gotfredsen, Bjarne Henning Nielsen, Erik Brinch Petersen, Esben Kannegaard, Jesper Hansen, Kristoffer Buck Pedersen, Lisbeth Pedersen, Lutz Klassen, Morten Meldgaard, Morten Johansen, Otto Christian Uldum, Per Lotz, Per Lysdahl, Pernille Bangsgaard, Peter Vang Petersen, Rikke Maring, Rune Iversen, Sidsel Wåhlin, Søren Anker Sørensen, Søren H. Andersen, Thomas Jørgensen, Niels Lynnerup, Daniel J. Lawson, Simon Rasmussen, Thorfinn Sand Korneliussen, Kurt H. Kjær, Richard Durbin, Rasmus Nielsen, Olivier Delaneau, Thomas Werge, Kristian Kristiansen, Eske Willerslev. DOI 10.1038/s41586-023-06862-3

euka Methods in Ecology and Evolution, 2023. Nicola Alexandra Vogel, Joshua Daniel Rubin, Mikkel Swartz, Juliette Vlieghe, Peter Wad Sackett, Anders Gorm Pedersen, Mikkel Winther Pedersen, Gabriel Renaud. DOI 10.1111/2041-210X.14214

The ancestry and geographical origins of St Helena's liberated Africans American Journal of Human Genetics, 2023. Marcela Sandoval-Velasco, Anuradha Jagadeesan, Jazmín Ramos-Madrigal, María C. Ávila-Arcos, Cesar A. Fortes-Lima, Judy Watson, Erna Johannesdóttir, Diana I. Cruz-Dávalos, Shyam Gopalakrishnan, J. Víctor Moreno-Mayar, Jonas Niemann, Gabriel Renaud, Katharine A. Robson Brown, Helena Bennett, Andrew Pearson, Agnar Helgason, M. Thomas P. Gilbert, Hannes Schroeder. DOI 10.1016/j.ajhg.2023.08.001

HaploCart PLOS Computational Biology, 2023. Joshua Daniel Rubin, Nicola Alexandra Vogel, Shyam Gopalakrishnan, Peter Wad Sackett, Gabriel Renaud. DOI 10.1371/journal.pcbi.1011148

Benchmarking software tools for trimming adapters and merging next-generation sequencing data for ancient DNA Frontiers in Bioinformatics, 2023. Annette Lien, Leonardo Pestana Legori, Louis Kraft, Peter Wad Sackett, Gabriel Renaud. DOI 10.3389/fbinf.2023.1260486

Ancient Clostridium DNA and variants of tetanus neurotoxins associated with human archaeological remains Nature Communications, 2023. Harold P. Hodgins, Pengsheng Chen, Briallen Lobb, Xin Wei, Benjamin J.M. Tremblay, Michael J. Mansfield, Victoria C.Y. Lee, Pyung Gang Lee, Jeffrey Coffin, Ana T. Duggan, Alexis E. Dolphin, Gabriel Renaud, Min Dong, Andrew C. Doxey. DOI 10.1038/s41467-023-41174-0

Unsupervised detection of fragment length signatures of circulating tumor DNA using non-negative matrix factorization eLife, 2022. Gabriel Renaud, Maibritt Norgaard, Johan Lindberg, Henrik Gronberg, Bram De Laere, Jorgen Bjerggaard Jensen, Michael Borre, Claus Lindbjerg Andersen, Karina Dalsgaard Sorensen, Lasse Maretty, Soren Besenbacher. DOI 10.7554/eLife.71569

Benchmarking freely available HLA typing algorithms across varying genes, coverages and typing resolutions Frontiers in Immunology, 2022. Nikolas Hallberg Thuesen, Michael Schantz Klausen, Shyam Gopalakrishnan, Thomas Trolle, Gabriel Renaud. DOI 10.3389/fimmu.2022.987655

Author Correction: Population genomics of the Viking world Nature, 2021. Ashot Margaryan, Daniel J. Lawson, Martin Sikora, Fernando Racimo, Simon Rasmussen, Ida Moltke, Lara M. Cassidy, Emil Jørsboe, Andrés Ingason, Mikkel W. Pedersen, Thorfinn Korneliussen, Helene Wilhelmson, Magdalena M. Buś, Peter de Barros Damgaard, Rui Martiniano, Gabriel Renaud, Claude Bhérer, J. Víctor Moreno-Mayar, Anna K. Fotakis, Marie Allen, Raili Allmäe, Martyna Molak, Enrico Cappellini, Gabriele Scorrano, Hugh McColl, Alexandra Buzhilova, Allison Fox, Anders Albrechtsen, Berit Schütz, Birgitte Skar, Caroline Arcini, Ceri Falys, Charlotte Hedenstierna Jonson, Dariusz Błaszczyk, Denis Pezhemsky, Gordon Turner-Walker, Hildur Gestsdóttir, Inge Lundstrøm, Ingrid Gustin, Ingrid Mainland, Inna Potekhina, Italo M. Muntoni, Jade Cheng, Jesper Stenderup, Jilong Ma, Julie Gibson, Jüri Peets, Jörgen Gustafsson, Katrine H. Iversen, Linzi Simpson, Lisa Strand, Louise Loe, Maeve Sikora, Marek Florek, Maria Vretemark, Mark Redknap, Monika Bajka, Tamara Pushkina, Morten Søvsø, Natalia Grigoreva, Tom Christensen, Ole Kastholm, Otto Uldum, Pasquale Favia, Per Holck, Sabine Sten, Símun V. Arge, Sturla Ellingvåg, Vayacheslav Moiseyev, Wiesław Bogdanowicz, Yvonne Magnusson, Ludovic Orlando, Peter Pentz, Mads Dengsø Jessen, Anne Pedersen, Mark Collard, Daniel G. Bradley, Marie Louise Jørkov, Jette Arneborg, Niels Lynnerup, Neil Price, M. Thomas P. Gilbert, Morten E. Allentoft, Jan Bill, Søren M. Sindbæk, Lotte Hedeager, Kristian Kristiansen, Rasmus Nielsen, Thomas Werge, Eske Willerslev.

Population genomics of the Viking world Nature, 2020. Ashot Margaryan, Daniel J. Lawson, Martin Sikora, Fernando Racimo, Simon Rasmussen, Ida Moltke, Lara M. Cassidy, Emil Jørsboe, Andrés Ingason, Mikkel W. Pedersen, Thorfinn Korneliussen, Helene Wilhelmson, Magdalena M. Buś, Peter de Barros Damgaard, Rui Martiniano, Gabriel Renaud, Claude Bhérer, J. Víctor Moreno-Mayar, Anna K. Fotakis, Marie Allen, Raili Allmäe, Martyna Molak, Enrico Cappellini, Gabriele Scorrano, Hugh McColl, Alexandra Buzhilova, Allison Fox, Anders Albrechtsen, Berit Schütz, Birgitte Skar, Caroline Arcini, Ceri Falys, Charlotte Hedenstierna Jonson, Dariusz Błaszczyk, Denis Pezhemsky, Gordon Turner-Walker, Hildur Gestsdóttir, Inge Lundstrøm, Ingrid Gustin, Ingrid Mainland, Inna Potekhina, Italo M. Muntoni, Jade Cheng, Jesper Stenderup, Jilong Ma, Julie Gibson, Jüri Peets, Jörgen Gustafsson, Katrine H. Iversen, Linzi Simpson, Lisa Strand, Louise Loe, Maeve Sikora, Marek Florek, Maria Vretemark, Mark Redknap, Monika Bajka, Tamara Pushkina, Morten Søvsø, Natalia Grigoreva, Tom Christensen, Ole Kastholm, Otto Uldum, Pasquale Favia, Per Holck, Sabine Sten, Símun V. Arge, Sturla Ellingvåg, Vayacheslav Moiseyev, Wiesław Bogdanowicz, Yvonne Magnusson, Ludovic Orlando, Peter Pentz, Mads Dengsø Jessen, Anne Pedersen, Mark Collard, Daniel G. Bradley, Marie Louise Jørkov, Jette Arneborg, Niels Lynnerup, Neil Price, M. Thomas P. Gilbert, Morten E. Allentoft, Jan Bill, Søren M. Sindbæk, Lotte Hedeager, Kristian Kristiansen, Rasmus Nielsen, Thomas Werge, Eske Willerslev. DOI 10.1038/s41586-020-2688-8